In my experience with Apprentice, MWS and so on, their shufflers are excellent - it's our shuffling that's not up to speed.
This is, sadly, the truth. You simply don't get true randomness from riffle shuffling, except after ~9 (!) shuffles in a 60-card deck: http://www.jstor.org/pss/2665604
Your deck will simply behave differently online and off because of this.